A set-cover certificate checks each demand point directly.
Point one
Point 1 is covered by chosen site A.
point 1 covered
Point three
Point 3 is covered by chosen site B.
point 3 covered
Point five
Point 5 is covered by chosen site C.
point 5 covered
No missing point
The certificate covers all 5 points, so the number of missing points is 0.
missing points=0